PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_008223133.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family bHLH
Protein Properties Length: 205aa    MW: 22921.4 Da    PI: 8.647
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_008223133.1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.86.2e-11249454
                    HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
             HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                    +h ++Er+RR+++N+ +  Lr+l P     + k+ + a+i   ++e+Ik+L
  XP_008223133.1  2 SHIAVERNRRKQMNEHLKVLRSLTPCF---YIKRGDQASIIGGVIEFIKEL 49
                    89************************9...9******************99 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000832.91E-11154No hitNo description
SuperFamilySSF474594.06E-15169IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088814.532149IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-11261IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.6E-8249IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.8E-10455IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009913Biological Processepidermal cell differentiation
GO:0010374Biological Processstomatal complex development
GO:0005634Cellular Componentnucleus
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 205 aa     Download sequence    Send to blast
MSHIAVERNR RKQMNEHLKV LRSLTPCFYI KRGDQASIIG GVIEFIKELH QVLQSLESNK  60
RRKSLSPSPN PSPKPVVLPQ QYSSTPQLDQ NPNFNFNLGV DNHHHVINKE LAIGACCNSP  120
VADVEAKISG SNVVLKIISR RTSGQIAKII GVLERLSFEV LHLNISSMED TVLYSFVIKI  180
GLECQLSVEE LVLEVQQSLR SESTT
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_008223133.11e-148PREDICTED: transcription factor MUTE
SwissprotQ9M8K61e-82MUTE_ARATH; Transcription factor MUTE
TrEMBLM5XAT81e-146M5XAT8_PRUPE; Uncharacterized protein
STRINGSolyc01g080050.2.13e-93(Solanum lycopersicum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF112523036
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06120.11e-78bHLH family protein